This function adds a logical vector of rejections (TRUE/FALSE) to a SummarizedExperiment object.
Usage
prot.add_rejections(diff, alpha = 0.05, lfc = 1)
Arguments
- diff
A SummarizedExperiment object.
- alpha
A numeric value for the alpha level (adj. p value) threshold.
- lfc
A numeric value for the log2 fold change threshold.
Value
A SummarizedExperiment object. The results of this function can be accessed with SummarizedExperiment::rowData(se)