Generates density plots for a SummarizedExperiment object

Usage

prot.plot_density(
  se1,
  se2 = NULL,
  se3 = NULL,
  title1 = "",
  title2 = "",
  title3 = "",
  group = FALSE,
  basesize = 15,
  plot = TRUE,
  export = FALSE
)

Arguments

se1: A SummarizedExperiment object with normalized data.
se2: (optional) A second SummarizedExperiment object with normalized data.
se3: (optional) A third SummarizedExperiment object with normalized data.
title1: A title for the first density plot.
title2: (optional) A title for the second density plot.
title3: (optional) A title for the third density plot.
group: A logical value indicating whether to group the plots by condition (TRUE) or not (FALSE). If TRUE, prot.plot_imputation is called.
basesize: The base font size for the plots.
plot: A logical value indicating whether to plot the plots (TRUE) or not (FALSE).
export: A logical value indicating whether to export the plots (TRUE) or not (FALSE).

Value

(Invisibly) returns a ggplot object.