Generic summary function for flBootSpline objects

Usage

# S3 method for flBootSpline
summary(object, ...)

Arguments

object: object of class flBootSpline
...: Additional arguments. This has currently no effect and is only meant to fulfill the requirements of a generic function.

Value

A dataframe with statistical parameters extracted from a dose-response bootstrapping analysis.

Examples

# load example dataset
input <- read_data(data.growth = system.file('lac_promoters.xlsx', package = 'QurvE'),
                   data.fl = system.file('lac_promoters.xlsx', package = 'QurvE'),
                   sheet.growth = 1,
                   sheet.fl = 2 )
#> Sample data are stored in columns. If they are stored in row format, please run read_data() with data.format = 'row'.

# Extract time and normalized fluorescence data for single sample
time <- input$time[4,]
data <- input$norm.fluorescence[4,-(1:3)] # Remove identifier columns

# Perform linear fit
TestFit <- flBootSpline(time = time,
                       fl_data = data,
                       ID = 'TestFit',
                       control = fl.control(fit.opt = 's', x_type = 'time',
                       nboot.fl = 50))

summary(TestFit)
#>       max_slope.bt        lambda.bt             A.bt            dY.bt
#> 1 242.204881601297 15.0135061080576 7566.16780400274 6036.52111328711
#>        integral.bt  stdmax_slope.bt     stdlambda.bt          stdA.bt
#> 1 149410.714905203 2.68217247905569 0.26253550799591 60.7658289042527
#>           stddY.bt   stdintegral.bt reliable_fit.bt    ci90.mu.bt.lo
#> 1 86.9323042602533 3299.55118184396            TRUE 237.792707873251
#>      ci90.mu.bt.up ci90.lambda.bt.lo ci90.lambda.bt.up     ci90.A.bt.lo
#> 1 246.617055329344  14.5816351974043  15.4453770187108 7466.20801545524
#>       ci90.A.bt.up ci90.integral.bt.lo ci90.integral.bt.up    ci95.mu.bt.lo
#> 1 7666.12759255023     143982.95321107    154838.476599337 236.947823542348
#>      ci95.mu.bt.up ci95.lambda.bt.lo ci95.lambda.bt.up    ci95.A.bt.lo
#> 1 247.461939660246  14.4989365123856  15.5280757037295 7447.0667793504
#>       ci95.A.bt.up ci95.integral.bt.lo ci95.integral.bt.up
#> 1 7685.26882865507    142943.594588789    155877.835221618