Generic summary function for gcBootSpline objects
Source:R/growth_summaries.R
summary.gcBootSpline.Rd
Generic summary function for gcBootSpline objects
Usage
# S3 method for gcBootSpline
summary(object, ...)
Arguments
- object
object of class
gcBootSpline
- ...
Additional arguments. This has currently no effect and is only meant to fulfill the requirements of a generic function.
Value
A dataframe with statistical parameters extracted from the spline fit bootstrapping computation.
Examples
# Create random growth dataset
rnd.dataset <- rdm.data(d = 35, mu = 0.8, A = 5, label = 'Test1')
# Extract time and growth data for single sample
time <- rnd.dataset$time[1,]
data <- rnd.dataset$data[1,-(1:3)] # Remove identifier columns
# Introduce some noise into the measurements
data <- data + stats::runif(97, -0.01, 0.09)
# Perform bootstrapping spline fit
TestFit <- growth.gcBootSpline(time, data, gcID = 'TestFit',
control = growth.control(fit.opt = 's', nboot.gc = 50))
summary(TestFit)
#> mu.bt lambda.bt A.bt dY.bt
#> 1 0.635161434858602 5.09236401045144 6.05052709591363 5.96867339173898
#> integral.bt stdmu.bt stdlambda.bt stdA.bt
#> 1 69.1971625397083 0.0168712361357962 0.24525446207061 0.0667436030440522
#> stddY.bt stdintegral.bt reliable_fit.bt ci90.mu.bt.lo
#> 1 0.0702191988143141 1.36212860405581 TRUE 0.607408251415218
#> ci90.mu.bt.up ci90.lambda.bt.lo ci90.lambda.bt.up ci90.A.bt.lo
#> 1 0.662914618301987 4.68892042034529 5.49580760055759 5.94073386890617
#> ci90.A.bt.up ci90.integral.bt.lo ci90.integral.bt.up ci95.mu.bt.lo
#> 1 6.1603203229211 66.9564609860365 71.4378640933801 0.602093812032442
#> ci95.mu.bt.up ci95.lambda.bt.lo ci95.lambda.bt.up ci95.A.bt.lo
#> 1 0.668229057684763 4.61166526479305 5.57306275610984 5.91970963394729
#> ci95.A.bt.up ci95.integral.bt.lo ci95.integral.bt.up
#> 1 6.18134455787998 66.5273904757589 71.8669346036577